Protein ZmOrphan71
ZmOrphan71 is a protein in the Orphans family.
Information
Orphans Name: ZmOrphan71
Species: Maize
Orphans Family: Orphans
Gene Name(Synonym):
Uniprot ID: B4FR17

Protein ZmOrphan71

ZmOrphan71 is a protein in the Orphans family.

Overview of domains present in v5 transcripts
PF00481
Zm00001eb425880_T003
Zm00001eb425880_T001
Zm00001eb425880_T002

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d025780DAPseq no logo sequence fimo position
Zm00001d025780DAPseq no logo sequence fimo position
Zm00001d025780ChIPseq no logo sequence fimo position
Zm00001d025780PChIPseq no logo sequence fimo position

Interactions where ZmOrphan71 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmOrphan71 is the target  
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There are 29 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb425880_T003 from maize genome v5

Amino Acid Sequence
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MSLAVPVTLKTTQSGENERLEYAVSAMQGYRLNMEDAHAIVLNLDAATGTSFFGVYDGHGGPAVSKYCARHLHAELRRHE
SFRDNLQTAIERTFLRMDEMMRDRRAGRELSGYGGNDNWKAYRKAINMSLFLPFCQKPAYQGPVMDGCTACVVLIRDNRI
IVGNAGDSRCVLSRNNQAIDLSTDFKPNLPDERQRIEAAGHVVTFSERGNVHRIDDGIAVSRSLGDLMYKDNNDLGPVQQ
AITAFPEVRTEEITQDDQFLIIACDGIWDCLTSQQAVDFIRIYSFADVGLASICEALLAHCVAQPRGRDNMTVILVRFKT
PGACQVRASNVPPPPIRQDAAASQAAGSQAAAASQAAGSQAAAGH

MSLAVPVTLKTTQSGENERLEYAVSAMQGYRLNMEDAHAIVLNLDAATGTSFFGVYDGHGGPAVSKYCARHLHAELRRHE
SFRDNLQTAIERTFLRMDEMMRDRRAGRELSGYGGNDNWKAYRKAINMSLFLPFCQKPAYQGPVMDGCTACVVLIRDNRI
IVGNAGDSRCVLSRNNQAIDLSTDFKPNLPDERQRIEAAGHVVTFSERGNVHRIDDGIAVSRSLGDLMYKDNNDLGPVQQ
AITAFPEVRTEEITQDDQFLIIACDGIWDCLTSQQAVDFIRIYSFADVGLASICEALLAHCVAQPRGRDNMTVILVRFKT
PGACQVRASNVPPPPIRQDAAASQAAGSQAAAASQAAGSQAAAGH

MSLAVPVTLKTTQSGENERLEYAVSAMQGYRLNMEDAHAIVLNLDAATGTSFFGVYDGHGGPAVSKYCARHLHAELRRHE
SFRDNLQTAIERTFLRMDEMMRDRRAGRELSGYGGNDNWKAYRKAINMSLFLPFCQKPAYQGPVMDGCTACVVLIRDNRI
IVGNAGDSRCVLSRNNQAIDLSTDFKPNLPDERQRIEAAGHVVTFSERGNVHRIDDGIAVSRSLGDLMYKDNNDLGPVQQ
AITAFPEVRTEEITQDDQFLIIACDGIWDCLTSQQAVDFIRIYSFADVGLASICEALLAHCVAQPRGRDNMTVILVRFKT
PGACQVRASNVPPPPIRQDAAASQAAGSQAAAASQAAGSQAAAGH

MSLAVPVTLKTTQSGENERLEYAVSAMQGYRLNMEDAHAIVLNLDAATGTSFFGVYDGHGGPAVSKYCARHLHAELRRHE
SFRDNLQTAIERTFLRMDEMMRDRRAGRELSGYGGNDNWKAYRKAINMSLFLPFCQKPAYQGPVMDGCTACVVLIRDNRI
IVGNAGDSRCVLSRNNQAIDLSTDFKPNLPDERQRIEAAGHVVTFSERGNVHRIDDGIAVSRSLGDLMYKDNNDLGPVQQ
AITAFPEVRTEEITQDDQFLIIACDGIWDCLTSQQAVDFIRIYSFADVGLASICEALLAHCVAQPRGRDNMTVILVRFKT
PGACQVRASNVPPPPIRQDAAASQAAGSQAAAASQAAGSQAAAGH

MSLAVPVTLKTTQSGENERLEYAVSAMQGYRLNMEDAHAIVLNLDAATGTSFFGVYDGHGGPAVSKYCARHLHAELRRHE
SFRDNLQTAIERTFLRMDEMMRDRRAGRELSGYGGNDNWKAYRKAINMSLFLPFCQKPAYQGPVMDGCTACVVLIRDNRI
IVGNAGDSRCVLSRNNQAIDLSTDFKPNLPDERQRIEAAGHVVTFSERGNVHRIDDGIAVSRSLGDLMYKDNNDLGPVQQ
AITAFPEVRTEEITQDDQFLIIACDGIWDCLTSQQAVDFIRIYSFADVGLASICEALLAHCVAQPRGRDNMTVILVRFKT
PGACQVRASNVPPPPIRQDAAASQAAGSQAAAASQAAGSQAAAGH

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00481
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Nucleotide Sequence
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GACCGCATTCTCTTTCCTCTCTCTC...

GRMZM2G109496_T01 from maize genome v3

Amino Acid Sequence
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MSLAVPVTLKTTQSGENERLEYAVSAMQGYRLNMEDAHAIVLNLDAATGTSFFGVYDGHGGPAVSKYCARHLHAELRRHE
SFRDNLQTAIERTFLRMDEMMRDRRAGRELSGYGGNDNWKAYRKAINMSLFLPFCQKPAYQGPVMDGCTACVVLIRDNRI
IVGNAGDSRCVLSRNNQAIDLSTDFKPNLPDERQRIEAAGHVVTFSERGNVHRIDDGIAVSRSLGDLMYKDNNDLGPVQQ
AITAFPEVRTVSITIFCHQNVILSSWVAV

Nucleotide Sequence
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GACGACCGCATTCTCTTTCCTCTCT...

GRMZM2G109496_T02 from maize genome v3

Amino Acid Sequence
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MSLAVPVTLKTTQSGENERLEYAVSAMQGYRLNMEDAHAIVLNLDAATGTSFFGVYDGHGGPAVSKYCARHLHAELRRHE
SFRDNLQTAIERTFLRMDEMMRDRRAGRELSGYGGNDNWKAYRKAINMSLFLPFCQKPAYQGPVMDGCTACVVLIRDNRI
IVGNAGDSRCVLSRNNQAIDLSTDFKPNLPDERQRIEAAGHVVTFSERGNVHRIDDGIAVSRSLGDLMYKDNNDLGPVQQ
AITAFPEVRTVSITIFCHQNVILSSWVAV

Nucleotide Sequence
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GACGACCGCATTCTCTTTCCTCTCT...

GRMZM2G109496_T03 from maize genome v3

Amino Acid Sequence
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MDEMMRDRRAGRELSGYGGNDNWKAYRKAINMSLFLPFCQKPAYQGPVMDGCTACVVLIRDNRIIVGNAGDSRCVLSRNN
QAIDLSTDFKPNLPDERQRIEAAGHVVTFSERGNVHRIDDGIAVSRSLGDLMYKDNNDLGPVQQAITAFPEVRTEEITQD
DQFLIIACDGIWDCLTSQQAVDFIRIYSFADVGLASICEALLAHCVAQPRGRDNMTVILVRFKTPGACQVRASNVPPPPI
RQDAAASQAAGSQAAAASQAAGSQAAAGH

Nucleotide Sequence
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GACGACCGCATTCTCTTTCCTCTCT...

GRMZM2G109496_T04 from maize genome v3

Amino Acid Sequence
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MDEMMRDRRAGRELSGYGGNDNWKAYRKAINMSLFLPFCQKPAYQGPVMDGCTACVVLIRDNRIIVGNAGDSRCVLSRNN
QAIDLSTDFKPNLPDERQRIEAAGHVVTFSERGNVHRIDDGIAVSRSLGDLMYKDNNDLGPVQQAITAFPEVRTVSITIF
CHQNVILSSWVAV

Nucleotide Sequence
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GACGACCGCATTCTCTTTCCTCTCT...

GRMZM2G109496_T05 from maize genome v3


Related TFome: pUT6021

Amino Acid Sequence
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MSLAVPVTLKTTQSGENERLEYAVSAMQGYRLNMEDAHAIVLNLDAATGTSFFGVYDGHGGPAVSKYCARHLHAELRRHE
SFRDNLQTAIERTFLRMDEMMRDRRAGRELSGYGGNDNWKAYRKAINMSLFLPFCQKPAYQGPVMDGCTACVVLIRDNRI
IVGNAGDSRCVLSRNNQAIDLSTDFKPNLPDERQRIEAAGHVVTFSERGNVHRIDDGIAVSRSLGDLMYKDNNDLGPVQQ
AITAFPEVRTEEITQDDQFLIIACDGIWDCLTSQQAVDFIRIYSFADVGLASICEALLAHCVAQPRGRDNMTVILVRFKT
PGACQVRASNVPPPPIRQDAAASQAAGSQAAAASQAAGSQAAAGH

Nucleotide Sequence
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CGCATTCTCTTTCCTCTCTCTCGCA...

Zm00001d025780_T001 from maize genome v4

Amino Acid Sequence
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MSLAVPVTLKTTQSGENERLEYAVSAMQGYRLNMEDAHAIVLNLDAATGTSFFGVYDGHGGPAVSKYCARHLHAELRRHE
SFRDNLQTAIERTFLRMDEMMRDRRAGRELSGYGGNDNWKAYRKAINMSLFLPFCQKPAYQGPVMDGCTACVVLIRDNRI
IVGNAGDSRCVLSRNNQAIDLSTDFKPNLPDERQRIEAAGHVVTFSERGNVHRIDDGIAVSRSLGDLMYKDNNDLGPVQQ
AITAFPEVRTEEITQDDQFLIIACDGIWDCLTSQQAVDFIRIYSFADVGLASICEALLAHCVAQPRGRDNMTVILVRFKT
PGACQVRASNVPPPPIRQDAAASQAAGSQAAAASQAAGSQAAAGH

Nucleotide Sequence
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AGGATATTTTACTCACACTAGTACG...

Zm00001eb425880_T001 from maize genome v5

Amino Acid Sequence
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MDEMMRDRRAGRELSGYGGNDNWKAYRKAINMSLFLPFCQKPAYQGPVMDGCTACVVLIRDNRIIVGNAGDSRCVLSRNN
QAIDLSTDFKPNLPDERQRIEAAGHVVTFSERGNVHRIDDGIAVSRSLGDLMYKDNNDLGPVQQAITAFPEVRTEEITQD
DQFLIIACDGIWDCLTSQQAVDFIRIYSFADVGLASICEALLAHCVAQPRGRDNMTVILVRFKTPGACQVRASNVPPPPI
RQDAAASQAAGSQAAAASQAAGSQAAAGH

Nucleotide Sequence
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GACGACCGCATTCTCTTTCCTCTCT...

Zm00001eb425880_T002 from maize genome v5

Amino Acid Sequence
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MSLAVPVTLKTTQSGENERLEYAVSAMQGYRLNMEDAHAIVLNLDAATGTSFFGVYDGHGGPAVSKYCARHLHAELRRHE
SFRDNLQTAIERTFLRMDEMMRDRRAGRELSGYGGNDNWKAYRKAINMSLFLPFCQKPAYQGPVMDGCTACVVLIRDNRI
IVGNAGDSRCVLSRNNQAIDLSTDFKPNLPDERQRIEAAGHVVTFSERGNVHRIDDGIAVSRSLGDLMYKDNNDLGPVQQ
AITAFPEVRTEEITQDDQFLIIACDGIWDCLTSQQAVDFIRIYSFADVGLASICEALLAHCVAQPRGRDNMTVILVRFKT
PGACQVRASNVPPPPIRQDAAASQAAGSQAAAASQAAGSQAAAGH

Nucleotide Sequence
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GACGACCGCATTCTCTTTCCTCTCT...


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